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how to put label in dataframe in Density plotting in matplotlib

Time:02-04

#dataframe
a=
timestamp      count
2021-08-16     20
2021-08-17     60
2021-08-18     35
2021-08-19      1
2021-08-20      0
2021-08-21      1
2021-08-22     50
2021-08-23     36
2021-08-24     68
2021-08-25    125
2021-08-26     54


I applied this code
a.plot(kind="density")

this is not what i want. plot

I want to put Count on Y axis and timestamp in X axis with Density plotting.

just like i can do it with plt.bar(a['timestamp'],a['count'])

OR this is not possible with Density plotting?

CodePudding user response:

The following code creates a density histogram. The total area sums to 1, supposing each of the timestamps counts as 1 unit. To get the timestamps as x-axis, they are set as the index. To get the total area to sum to 1, all count values are divided by their total sum.

A kde a calculated from the same data.

from matplotlib import pyplot as plt
import pandas as pd
import numpy as np
from scipy.stats import gaussian_kde
from io import StringIO

a_str = '''timestamp      count
2021-08-16     20
2021-08-17     60
2021-08-18     35
2021-08-19      1
2021-08-20      0
2021-08-21      1
2021-08-22     50
2021-08-23     36
2021-08-24     68
2021-08-25    125
2021-08-26     54'''
a = pd.read_csv(StringIO(a_str), delim_whitespace=True)

ax = (a.set_index('timestamp') / a['count'].sum()).plot.bar(width=0.9, rot=0, figsize=(12, 5))

kde = gaussian_kde(np.arange(len(a)), bw_method=0.2, weights=a['count'])

xs = np.linspace(-1, len(a), 200)
ax.plot(xs, kde(xs), lw=2, color='crimson', label='kde')
ax.set_xlim(xs[0], xs[-1])
ax.legend(labels=['kde', 'density histogram'])
ax.set_xlabel('')
ax.set_ylabel('density')
plt.tight_layout()
plt.show()

density histogram from counts

If you just want to plot the kde curve, you can leave out the histogram. Optionally you can fill the area under the curve.

fig, ax = plt.subplots(figsize=(12, 5))

kde = gaussian_kde(np.arange(len(a)), bw_method=0.2, weights=a['count'])

xs = np.linspace(-1, len(a), 200)
# plot the kde curve
ax.plot(xs, kde(xs), lw=2, color='crimson', label='kernel density estimation')
# optionally fill the area below the curve
ax.fill_between(xs, kde(xs), color='crimson', alpha=0.2)
ax.set_xticks(np.arange(len(a)))
ax.set_xticklabels(a['timestamp'])
ax.set_xlim(xs[0], xs[-1])
ax.set_ylim(ymin=0)
ax.legend()
ax.set_xlabel('')
ax.set_ylabel('density')
plt.tight_layout()
plt.show()

density plot

CodePudding user response:

You can try this:

a.xlabel("timestamp")
a.ylabel("Count")
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